Extend set definition data with genes on the same row separated by commas, semicolons, slashes, etc

Usage

extend_set_data(set.data, sep)

Arguments

set.data: A data frame with set definition data.
sep: Punctuation to split on.

Value

A data frame.

Examples

data(setdat)
extend_set_data(setdat, sep=",")
#>             set.id mtx.id                   row.id
#> 1  ENSG00000121410    RNA          ENSG00000121410
#> 2  ENSG00000148584    RNA          ENSG00000148584
#> 3  ENSG00000175899    RNA          ENSG00000175899
#> 4  ENSG00000166535    RNA          ENSG00000166535
#> 5  ENSG00000184389    RNA          ENSG00000184389
#> 6  ENSG00000128274    RNA          ENSG00000128274
#> 7  ENSG00000118017    RNA          ENSG00000118017
#> 8  ENSG00000094914    RNA          ENSG00000094914
#> 9  ENSG00000081760    RNA          ENSG00000081760
#> 10 ENSG00000114771    RNA          ENSG00000114771
#> 11 ENSG00000197953    RNA          ENSG00000197953
#> 12 ENSG00000188984    RNA          ENSG00000188984
#> 13 ENSG00000204518    RNA          ENSG00000204518
#> 14 ENSG00000109576    RNA          ENSG00000109576
#> 15 ENSG00000224854    RNA          ENSG00000224854
#> 16 ENSG00000147889    RNA          ENSG00000147889
#> 17 ENSG00000147883    RNA          ENSG00000147883
#> 18 ENSG00000176399    RNA          ENSG00000176399
#> 19 ENSG00000099810    RNA          ENSG00000099810
#> 20 ENSG00000148400    RNA          ENSG00000148400
#> 21 ENSG00000264545 Lesion     ENSG00000264545_loss
#> 22 ENSG00000147889 Lesion     ENSG00000147889_loss
#> 23 ENSG00000224854 Lesion     ENSG00000224854_loss
#> 24 ENSG00000148400 Lesion ENSG00000148400_mutation
#> 25 ENSG00000099810 Lesion     ENSG00000099810_loss
#> 26 ENSG00000264801 Lesion     ENSG00000264801_loss
#> 27 ENSG00000240498 Lesion     ENSG00000240498_loss
#> 28 ENSG00000265194 Lesion     ENSG00000265194_loss
#> 29 ENSG00000266446 Lesion     ENSG00000266446_loss
#> 30 ENSG00000147883 Lesion     ENSG00000147883_loss
#> 31 ENSG00000215221 Lesion     ENSG00000215221_loss
#> 32 ENSG00000266732 Lesion     ENSG00000266732_loss
#> 33 ENSG00000236921 Lesion     ENSG00000236921_loss
#> 34 ENSG00000229298 Lesion     ENSG00000229298_loss
#> 35 ENSG00000244230 Lesion     ENSG00000244230_loss
#> 36 ENSG00000229835 Lesion     ENSG00000229835_loss
#> 37 ENSG00000176399 Lesion     ENSG00000176399_loss
#> 38 ENSG00000227443 Lesion     ENSG00000227443_loss
#> 39 ENSG00000171889 Lesion     ENSG00000171889_loss
#> 40 ENSG00000199177 Lesion     ENSG00000199177_loss